MYC quantitation in cell-free plasma DNA by real-time PCR for gastric cancer diagnosis

Clin Chem Lab Med. 2009;47(5):530-6. doi: 10.1515/CCLM.2009.126.

Abstract

Background: Detection of tumor-associated genetic alterations in plasma of cancer patients has recently been suggested to be an accurate method for detecting early or recurrent cancer.

Methods: We performed quantitative real-time PCR for MYC and GAPDH in tissue and plasma samples of 57 patients with gastric cancer and in plasma of 79 cancer-free individuals. We also performed two-color MYC fluorescence in situ hybridization (FISH) in tissue from the 57 patients with gastric cancer.

Results: The tissue MYC/GAPDH ratio by real-time PCR was significantly correlated with MYC status by FISH (p<0.001). The mean ratio of plasma MYC/GAPDH was 5.226+/-3.578 (range: 1.25-18.35) in gastric cancer patients, and 2.436+/-0.881 (range: 1.00-5.00) in the healthy volunteers (p<0.001). We used receiver-operating characteristics (ROC) curve analysis to select two optimal plasma MYC/GAPDH cut-offs of 2.725 and 5.225. The sensitivity and specificity were 75.4% and 76.9% at 2.725, 38.6% and 100% at 5.225, respectively. The plasma MYC/GAPDH ratio from cancer patients was significantly correlated with the tissue MYC/GAPDH ratio (p=0.009), and tissue MYC status by FISH (p=0.024).

Conclusions: These findings suggest that the plasma MYC/GAPDH ratio, as determined by real-time PCR, may be an alternative non-invasive approach for detecting gastric cancer.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Biomarkers, Tumor / blood*
  • Cell Nucleolus / genetics
  • Centromere / genetics
  • DNA / blood*
  • DNA / genetics
  • Female
  • Gene Amplification
  • Genes, myc / genetics*
  • Glyceraldehyde-3-Phosphate Dehydrogenases / blood
  • Glyceraldehyde-3-Phosphate Dehydrogenases / genetics
  • Humans
  • In Situ Hybridization, Fluorescence
  • Male
  • Middle Aged
  • Reverse Transcriptase Polymerase Chain Reaction
  • Stomach Neoplasms / blood
  • Stomach Neoplasms / diagnosis*
  • Stomach Neoplasms / genetics
  • Stomach Neoplasms / pathology

Substances

  • Biomarkers, Tumor
  • DNA
  • Glyceraldehyde-3-Phosphate Dehydrogenases