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EBER In Situ Hybridization for Epstein–Barr Virus

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Part of the book series: Methods in Molecular Biology ((MIMB,volume 999))

Abstract

Epstein–Barr encoding region (EBER) in situ hybridization is the methodology of choice for the detection of the Epstein–Barr virus (EBV) in tissue sections. Because of the large numbers of copies of EBERs present in latently infected cells, non-isotopic methods can be used. Positive studies show staining in the nuclei of the EBV-infected cells, accentuating the chromatin and often excluding the nucleolus. False-negative results are most often the result of RNA degradation in the tissues, a finding that may be detected through the use of a polyT probe as a control for RNA preservation.

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References

  1. Rickinson A (2002) Epstein-Barr virus. Virus Res 82:109–113

    Article  PubMed  CAS  Google Scholar 

  2. Swaminathan S (2008) Noncoding RNAs produced by oncogenic human herpesviruses. J Cell Physiol 216:321–326

    Article  PubMed  CAS  Google Scholar 

  3. Gan YJ, Razzouk BI, Su T, Sixbey JW (2002) A defective, rearranged Epstein-Barr virus genome in EBER-negative and EBER-positive Hodgkin’s disease. Am J Pathol 160:781–786

    Article  PubMed  CAS  Google Scholar 

  4. Deamant FD, Albujar PF, Chen Y-Y, Weiss LM (1993) Epstein-Barr virus distribution in non-neoplastic lymph nodes. Mod Pathol 6:729–732

    PubMed  CAS  Google Scholar 

  5. Niedobitek G, Herbst H, Young LS, Brooks L, Masucci MG, Croker J et al (1992) Patterns of Epstein-Barr virus infection in non-neoplastic lymphoid tissue. Blood 15:2520–2526

    Google Scholar 

  6. Rezk RA, Weiss LM (2007) Epstein-Barr virus-associated lymphoproliferative disorders. Hum Pathol 38:1293–1304

    Article  PubMed  CAS  Google Scholar 

  7. Gulley ML, Tang W (2008) Laboratory assays for Epstein-Barr virus-related disease. J Mol Diagn 10:279–292

    Article  PubMed  Google Scholar 

  8. Chang KL, Weiss LM (1992) Description of an in situ hybridization methodology for detection of Epstein-Barr virus RNA in paraffin-embedded tissues, with a survey of normal and neoplastic tissues. Diagn Mol Pathol 1:246–255

    PubMed  CAS  Google Scholar 

  9. Hamilton-Dutoit SJ, Pallesen G (1994) Detection of Epstein-Barr virus small RNAs in routine paraffin sctions using non-isotopic RNA/RNA in situ hybridization. Histopathology 25:101–111

    Article  PubMed  CAS  Google Scholar 

  10. Gulley ML, Glaser SL, Craig FE, Borowitz M, Mann RB, Shema SJ, Ambinder RF (2002) Guidelines for interpreting EBER in situ hybridization and LMP1 immunohistochemical tests for detecting Epstein-Barr virus in Hodgkin lymphoma. Am J Clin Pathol 117:259–267

    Article  PubMed  Google Scholar 

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Weiss, L.M., Chen, YY. (2013). EBER In Situ Hybridization for Epstein–Barr Virus. In: Czader, M. (eds) Hematological Malignancies. Methods in Molecular Biology, vol 999. Humana Press, Totowa, NJ. https://doi.org/10.1007/978-1-62703-357-2_16

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  • DOI: https://doi.org/10.1007/978-1-62703-357-2_16

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  • Publisher Name: Humana Press, Totowa, NJ

  • Print ISBN: 978-1-62703-356-5

  • Online ISBN: 978-1-62703-357-2

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